STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqceUncharacterized protein. (714 aa)    
Predicted Functional Partners:
LOC109982950
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.897
efcab7
EF-hand calcium binding domain 7.
   
 0.882
ttc34
Tetratricopeptide repeat domain 34.
   
    0.808
LOC109991277
Tetratricopeptide repeat domain 23.
    
 
 0.805
EVC2
EvC ciliary complex subunit 2.
     
 0.777
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.738
ENSLBEP00000037280
Uncharacterized protein.
    
 0.716
ENSLBEP00000002753
Uncharacterized protein.
    
 0.682
LOC110002514
GLE1 RNA export mediator.
    
 0.682
ENSLBEP00000011796
C-type lectin domain-containing protein.
    
 0.680
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.