STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985851Small integral membrane protein 29. (103 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.615
tgfa
Transforming growth factor, alpha.
     
 0.476
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.459
mst1r
Macrophage stimulating 1 receptor b.
    
  0.459
LOC109980643
Macrophage stimulating 1 receptor a.
    
  0.459
LOC109985899
Bone morphogenetic protein 10.
    
 0.423
LOC109992287
Growth differentiation factor 10b.
    
 0.423
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.423
LOC109992254
Growth differentiation factor 2.
    
 0.423
LOC109987676
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.423
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.