STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000011680Uncharacterized protein. (59 aa)    
Predicted Functional Partners:
LOC109984841
Myogenic factor.
    
 0.762
myog
Myogenin.
    
 0.762
myf6
Myogenic factor 6.
    
 0.762
myf5
Myogenic factor.
    
 0.762
LOC109988648
Myogenic factor.
    
 0.762
id2
Inhibitor of DNA binding 2a.
    
 
 0.705
LOC109983917
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.705
LOC109987449
Inhibitor of DNA binding 4.
    
 
 0.705
LOC109982422
Uncharacterized protein.
    
 0.654
LOC109981863
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.654
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.