STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109989526Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (460 aa)    
Predicted Functional Partners:
LOC109984115
Trafficking protein, kinesin binding 2.
    
  0.847
LOC109984258
Trafficking protein, kinesin binding 1a.
    
  0.736
LOC109990659
Si:dkey-28e7.3.
    
  0.736
LOC109990918
Uncharacterized protein.
    
  0.736
ENSLBEP00000001365
Uncharacterized protein.
     
 0.721
gphn
Gephyrin b.
     
 0.721
LOC110000293
Gephyrin a.
     
 0.721
LOC109978894
Uncharacterized protein.
     
 0.667
gabarap
GABA(A) receptor-associated protein b.
     
 0.667
LOC110003619
GABA(A) receptor-associated protein like 2.
     
 0.667
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.