STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000011796C-type lectin domain-containing protein. (157 aa)    
Predicted Functional Partners:
ENSLBEP00000037280
Uncharacterized protein.
   
 0.880
ENSLBEP00000006601
Hyaluronan binding protein 2.
    
 0.878
LOC109987245
Uncharacterized protein.
    
 0.878
hgfac
HGF activator.
    
 0.878
col22a1
Collagen, type XXII, alpha 1.
    
 0.869
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
   
 0.860
pcsk1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
    
 0.856
LOC109980875
Uncharacterized protein.
    
 0.856
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.856
LOC109983905
P/Homo B domain-containing protein.
    
 0.856
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.