STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109977906Spectrin beta chain; Belongs to the spectrin family. (2079 aa)    
Predicted Functional Partners:
ENSLBEP00000001062
PH domain-containing protein.
 
  
  0.942
ENSLBEP00000006483
Uncharacterized protein.
   
 0.891
LOC109988516
Spectrin alpha, non-erythrocytic 1.
   
0.891
LOC109989952
Ankyrin 2a, neuronal.
   
 0.715
ENSLBEP00000005396
Ankyrin 1, erythrocytic a.
   
 0.715
LOC110000422
Ankyrin 1, erythrocytic a.
   
 0.715
LOC109992409
Uncharacterized protein.
   
 0.715
LOC109975767
Uncharacterized protein.
   
 0.715
LOC110000562
Ankyrin 1, erythrocytic b.
   
 0.715
LOC109991322
Ankyrin 2.
   
 0.715
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.