STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109984941Zgc:174906. (225 aa)    
Predicted Functional Partners:
ENSLBEP00000029041
CARD domain-containing protein.
    
 0.897
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.875
ENSLBEP00000015855
BRCA1/BRCA2-containing complex, subunit 3.
    
  0.864
il1b
Interleukin-1.
     
 0.840
LOC109982052
Gamma-glutamyltransferase 5a.
    
  0.826
ggt1
Gamma-glutamyltransferase 1a.
    
  0.826
LOC109981153
Gamma-glutamyltransferase 1b.
    
  0.826
LOC109992315
Uncharacterized protein.
     
 0.825
LOC109995799
Uncharacterized protein; Belongs to the peptidase C14A family.
    
  0.810
LOC109995961
Uncharacterized protein; Belongs to the peptidase C14A family.
    
  0.810
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.