STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000012791Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
rabgef1
Uncharacterized protein.
   
 0.712
LOC110000582
Uncharacterized protein.
   
 0.712
LOC109977836
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.712
ENSLBEP00000029131
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.712
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.673
CFAP74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
    
 
 0.672
rsph14
Uncharacterized protein.
    
 
 0.625
tsnaxip1
TSNAXIP1_N domain-containing protein.
    
 
 0.607
cfap99
Cilia and flagella associated protein 99.
    
 
 0.578
ENSLBEP00000026370
Uncharacterized protein.
   
 0.555
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.