STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991866Zinc and ring finger 1. (203 aa)    
Predicted Functional Partners:
ENSLBEP00000003618
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.808
LOC109977673
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.808
LOC110002044
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.808
LOC109987635
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.808
ubb
Ubiquitin B.
   
  0.530
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
     
 0.451
uba5
Ubiquitin-like modifier activating enzyme 5.
     
 0.451
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 
 0.436
klhl22
Kelch-like family member 22.
      
 0.426
klhl21
Kelch-like family member 21.
      
 0.424
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.