STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991878Matrix metallopeptidase 17a. (609 aa)    
Predicted Functional Partners:
LOC109994449
TIMP metallopeptidase inhibitor 2b.
    
 0.802
LOC109993327
TIMP metallopeptidase inhibitor 2a.
    
 0.802
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.799
LOC109988080
Heparin-binding EGF-like growth factor a.
    
 0.662
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.593
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.534
LOC109975720
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 0.534
LOC110000815
Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family.
     
 0.532
LOC109984883
Cytochrome b-245, alpha polypeptide.
     
 0.530
LOC109990259
Endothelin 1.
     
 0.530
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.