STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000013572C-type lectin domain-containing protein. (703 aa)    
Predicted Functional Partners:
LOC109993700
Si:dkey-26c10.5.
    
0.795
ENSLBEP00000001786
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
 0.601
ENSLBEP00000005647
Uncharacterized protein.
   
 0.601
tyrobp
Uncharacterized protein.
    
 0.593
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
  0.590
LOC109985568
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.590
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.590
LOC109985035
Collectin sub-family member 12.
    
 
0.575
LOC109984846
Lymphocyte specific protein 1.
    
 0.520
LOC109988652
Uncharacterized protein.
    
 0.520
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]