STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109982072Si:dkey-3h3.3. (474 aa)    
Predicted Functional Partners:
LOC109990977
Poly [ADP-ribose] polymerase.
 
 
 
 0.917
LOC109982735
Notch receptor 2.
    
 0.865
LOC109989208
Notch receptor 3.
    
 0.865
notch1
Notch receptor 1b.
    
 0.862
LOC109998483
Notch receptor 1a.
    
 0.862
LOC109978926
Family with sequence similarity 162 member A.
   
 
 0.817
ENSLBEP00000015381
Macro domain-containing protein.
   
 
 0.817
ENSLBEP00000016540
Macro domain-containing protein.
   
 
 0.817
LOC109992791
Protein FAM162B-like.
   
 
 0.817
parp9
Uncharacterized protein.
   
 
 0.817
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.