STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpn3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (288 aa)    
Predicted Functional Partners:
ENSLBEP00000007062
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
 
 0.970
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.948
rpap2
RNA polymerase II associated protein 2.
    
 
 0.936
polr1c
RNA polymerase I and III subunit C.
   
 
 0.914
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 
 0.903
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.894
polr2d
RPOL4c domain-containing protein.
    
 
 0.891
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 
 0.888
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
    
 
 0.887
pih1d1
PIH1 domain containing 1.
    
 
 0.886
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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