STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994148Cell division cycle 42. (191 aa)    
Predicted Functional Partners:
arhgap1
Uncharacterized protein.
    
 0.981
PAK3
Non-specific serine/threonine protein kinase.
   
 0.979
ENSLBEP00000004788
Uncharacterized protein.
    
 0.979
LOC109990056
Intersectin 2a.
    
 0.979
pak1
Non-specific serine/threonine protein kinase.
   
 0.979
ENSLBEP00000004755
Uncharacterized protein.
    
 0.978
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.974
pard6g
Par-6 family cell polarity regulator gamma b.
    
 0.974
pak4
Non-specific serine/threonine protein kinase.
   
 0.968
LOC110003032
Non-specific serine/threonine protein kinase.
   
 0.965
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.