STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000014047DH domain-containing protein. (365 aa)    
Predicted Functional Partners:
tp53bp1
Tumor protein p53 binding protein, 1.
    
 0.858
gna12
G protein subunit alpha 12.
    
 0.554
LOC109991819
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.554
LOC109981841
Uncharacterized protein.
    
 0.554
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
    
 0.507
arhgef11
Rho guanine nucleotide exchange factor (GEF) 11.
    
 0.507
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
    
 0.507
ENSLBEP00000034531
DH domain-containing protein.
    
 0.507
ENSLBEP00000004755
Uncharacterized protein.
    
0.494
ENSLBEP00000004788
Uncharacterized protein.
    
 0.494
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.