STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109975771Uncharacterized protein. (898 aa)    
Predicted Functional Partners:
ENSLBEP00000001963
Uncharacterized protein.
   
  0.839
ENSLBEP00000009294
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  0.839
ENSLBEP00000009364
Uncharacterized protein.
   
  0.839
LOC109993151
Uncharacterized protein.
   
  0.839
LOC109997390
Uncharacterized protein.
    
 0.725
ENSLBEP00000006879
Calcium/calmodulin-dependent serine protein kinase b.
   
  0.682
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.682
LOC109995105
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.682
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.671
ENSLBEP00000015825
PCI domain-containing protein.
 
  
  0.659
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.