STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mifMacrophage migration inhibitory factor. (115 aa)    
Predicted Functional Partners:
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
 0.871
got2
Aspartate aminotransferase.
   
 
 0.857
LOC110001359
D-dopachrome tautomerase.
   
 
0.855
rps14
Ribosomal protein S14.
   
 0.854
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.854
LOC110001538
4-hydroxyphenylpyruvate dioxygenase.
     
 0.848
LOC109983357
4-hydroxyphenylpyruvate dioxygenase.
     
 0.848
LOC110001533
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.842
GOT1
Aspartate aminotransferase.
     
 0.842
got1
Aspartate aminotransferase.
     
 0.842
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.