STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrip1Nuclear receptor interacting protein 1b. (1207 aa)    
Predicted Functional Partners:
rora
RAR-related orphan receptor A, paralog a.
    
 0.893
LOC109999627
Uncharacterized protein.
    
 0.893
LOC109977616
Estrogen receptor 2b.
    
 0.891
LOC109988416
Estrogen receptor 2a.
    
 0.891
LOC109983285
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.891
LOC109979724
Uncharacterized protein.
    
 0.891
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.860
NR3C1
Nuclear receptor subfamily 3 group C member 1.
  
 0.849
ESRRB
Estrogen-related receptor beta.
    
 0.840
LOC109987682
Nuclear receptor domain-containing protein.
    
 0.840
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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