STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109997000Zgc:193690. (487 aa)    
Predicted Functional Partners:
nup214
Uncharacterized protein.
    
 
 0.938
ENSLBEP00000002753
Uncharacterized protein.
    
 
 0.901
LOC110002514
GLE1 RNA export mediator.
    
 
 0.901
mif4gd
MIF4G domain containing a.
    
   0.869
LOC109984234
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast).
  
  
 
0.834
LOC109976680
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast).
  
  
 
0.833
ctif
CBP80/20-dependent translation initiation factor.
    
   0.827
nxf1
Zgc:153681.
    
 
 0.805
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
  
0.719
ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59.
  
0.702
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.