STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109982147Glycerophosphodiester phosphodiesterase domain containing 5a. (591 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.857
pla2g4a
Phospholipase A2.
   
 
 0.846
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
 0.795
crls1
Cardiolipin synthase 1.
   
 0.774
mgll
Monoglyceride lipase.
    
 0.758
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
 0.705
ISYNA1
Inositol-3-phosphate synthase 1.
     
 0.696
nhej1
Nonhomologous end-joining factor 1.
    
 0.686
cnppd1
Cyclin Pas1/PHO80 domain containing 1.
    
 0.686
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 0.685
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.