STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMX3Thioredoxin related transmembrane protein 3. (476 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.907
LOC109987455
Cytochrome b5 reductase 4.
  
 0.849
prdx5
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.795
LOC109990563
Si:ch1073-358c10.1.
   
 0.737
ENSLBEP00000006911
PMSR domain-containing protein.
   
 0.737
LOC109986414
PMSR domain-containing protein.
   
 0.737
ENSLBEP00000034844
Uncharacterized protein.
   
 0.737
ENSLBEP00000034860
PMSR domain-containing protein.
   
 0.737
dld
Dihydrolipoyl dehydrogenase.
  
 0.735
LOC109994152
Thioredoxin reductase 3.
  
 0.735
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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