STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994770Si:ch211-113j14.1; Belongs to the cytochrome P450 family. (488 aa)    
Predicted Functional Partners:
LOC109975478
Cytochrome P450, family 7, subfamily B, polypeptide 1.
  
  
 0.919
LOC109981488
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
  
 0.919
LOC109983647
Cytochrome P450, family 46, subfamily A, polypeptide 1, tandem duplicate 4.
  
 
0.884
LOC109985922
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
  
 0.876
LOC109982995
Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.868
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.851
asmtl
Acetylserotonin O-methyltransferase-like.
     
 0.851
suox
Sulfite oxidase.
    
 0.845
LOC110002005
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
 0.843
LOC109987455
Cytochrome b5 reductase 4.
   
 0.838
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.