STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994773Transmembrane protein 198b. (420 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
    
 0.970
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.872
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.872
birc6
Baculoviral IAP repeat containing 6.
   
 0.834
ENSLBEP00000032852
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.834
tpx2
TPX2 microtubule nucleation factor.
    
 0.800
LOC109980896
RING-type domain-containing protein.
   
 0.719
xiap
X-linked inhibitor of apoptosis.
   
 0.719
LOC109998212
Baculoviral IAP repeat containing 2.
   
 0.719
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.703
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.