STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc51Coiled-coil domain containing 51. (434 aa)    
Predicted Functional Partners:
LOC109991330
Uncharacterized protein.
      
 0.560
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.554
abcb8
ATP-binding cassette, sub-family B (MDR/TAP), member 8.
    
 
 0.514
abcb10
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
    
 
 0.514
LOC109983046
Rho GTPase activating protein 23a.
      
 0.477
LOC109988372
Rho GTPase activating protein 23b.
      
 0.477
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
      
 0.475
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.