STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc16a10Solute carrier family 16 member 10. (499 aa)    
Predicted Functional Partners:
SLCO1C1
Solute carrier organic anion transporter family member.
   
 
 0.713
LOC109988470
Solute carrier organic anion transporter family member.
   
 
 0.713
ENSLBEP00000034903
Embigin.
    
 0.696
LOC109982877
Solute carrier organic anion transporter family member.
   
 
 0.650
SLCO5A1
Solute carrier organic anion transporter family member.
   
 
 0.610
gtf3c5
General transcription factor IIIC, polypeptide 5.
    
 
 0.581
LOC109987652
Solute carrier organic anion transporter family member.
   
 
 0.538
LOC109987658
Solute carrier organic anion transporter family member.
   
 
 0.538
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 
 0.527
thrb
Thyroid hormone receptor beta.
    
 
 0.499
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.