STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdft1Farnesyl-diphosphate farnesyltransferase 1. (419 aa)    
Predicted Functional Partners:
LOC109987880
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.995
LOC109999646
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
  
 0.995
LOC109995038
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
  
 
 0.994
LOC109992610
Phosphoethanolamine methyltransferase.
  
 0.987
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
 
 0.986
sqle
Squalene epoxidase a.
 
 
 0.985
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.980
LOC109995774
Amino_oxidase domain-containing protein.
  
 
 0.974
LOC109983121
Retinol saturase (all-trans-retinol 13,14-reductase).
  
 
 0.974
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
  
 
 0.974
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.