STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftoFTO alpha-ketoglutarate dependent dioxygenase. (654 aa)    
Predicted Functional Partners:
alkbh5
AlkB homolog 5, RNA demethylase.
     
 0.867
alkbh1
AlkB homolog 1, histone H2A dioxygenase.
     
 0.832
alkbh8
AlkB homolog 8, tRNA methyltransferase.
     
 0.812
alkbh7
AlkB homolog 7.
     
 0.767
LOC110000446
Uncharacterized protein.
     
 0.736
LOC109985023
Synovial sarcoma, X breakpoint 2 interacting protein a.
     
 0.736
ssx2ip
Synovial sarcoma, X breakpoint 2 interacting protein b.
     
 0.736
ENSLBEP00000008522
Melanocortin 4 receptor.
    
 
 0.561
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
      
 0.561
wtap
WT1 associated protein.
      
 0.560
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.