STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000015443Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
hddc3
HD domain containing 3.
    
  0.842
top2a
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.809
top2b
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.809
mocs1
Molybdenum cofactor synthesis 1.
  
 
  0.741
LOC109989739
Elp3 domain-containing protein.
  
 
  0.741
LOC109992925
Lysine methyltransferase 5C.
    
  0.712
kmt5b
Lysine methyltransferase 5B.
    
  0.712
LOC109991734
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.677
parp6
Poly [ADP-ribose] polymerase.
   
 0.677
ENSLBEP00000017713
Poly (ADP-ribose) polymerase family, member 6b.
   
 0.677
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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