STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991287Tetraspanin. (228 aa)    
Predicted Functional Partners:
ptgfrn
Si:ch211-132g1.7.
    
 
 0.914
igsf8
Immunoglobulin superfamily, member 8.
    
 
 0.854
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 0.751
LOC110005424
Tetraspanin.
  
 
 
0.731
LOC109982339
Tetraspanin.
  
 
 
0.730
ENSLBEP00000003682
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
    
 
0.723
LOC110003743
Tetraspanin.
    
 
0.723
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.701
mst1r
Macrophage stimulating 1 receptor b.
    
 0.701
LOC109980643
Macrophage stimulating 1 receptor a.
    
 0.701
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.