STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem108Transmembrane protein 108. (519 aa)    
Predicted Functional Partners:
cdv3
Carnitine deficiency-associated gene expressed in ventricle 3.
      
 0.548
SYNDIG1
Synapse differentiation inducing 1.
      
 0.493
LOC109998014
NGF domain-containing protein; Belongs to the NGF-beta family.
  
     0.468
ENSLBEP00000021834
Si:dkey-83h2.3.
  
     0.450
LOC109981367
Si:ch211-173a9.6.
  
     0.440
ryk
Receptor like tyrosine kinase.
      
 0.418
ENSLBEP00000007640
Uncharacterized protein.
  
     0.417
LOC109981363
Olfactomedin-like domain-containing protein.
  
     0.415
LOC110001380
Uncharacterized protein.
  
     0.404
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.