STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991950Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
    
  0.857
ifih1
Interferon induced with helicase C domain 1.
    
  0.857
pea15
Proliferation and apoptosis adaptor protein 15.
    
 0.546
LOC110005321
Plac8 onzin related protein 2.
    
 0.517
LOC109992818
Uncharacterized protein.
    
 0.517
LOC109990201
Misato mitochondrial distribution and morphology regulator 1.
    
 
 0.498
LOC109985061
Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
    
 
 0.439
LOC109988688
Protein S100; Belongs to the S-100 family.
    
 0.436
LOC109992891
Growth arrest-specific 7a.
    
  0.429
LOC109988571
Growth arrest specific 7.
    
  0.429
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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