STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988366Cell adhesion molecule 2a. (438 aa)    
Predicted Functional Partners:
LOC109999807
Cell adhesion molecule 1b.
     
0.737
nectin1
Nectin cell adhesion molecule 1b.
     
0.735
cadm1
Cell adhesion molecule 1a.
     
0.703
LOC109977467
Ig-like domain-containing protein.
     
0.668
LOC109981419
Nectin cell adhesion molecule 3b.
     
0.668
LOC109996785
Uncharacterized protein.
     
0.668
LOC109999884
Si:ch211-106h4.9.
   
  
 0.559
LOC109990494
Bicaudal C homolog 2.
      
 0.478
bicc1
BicC family RNA binding protein 1a.
      
 0.478
GMDS
GDP-mannose 4,6-dehydratase.
      
 0.426
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.