STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109979388Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)    
Predicted Functional Partners:
dhrs7
Dehydrogenase/reductase (SDR family) member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
0.836
LOC109993323
Threonine aldolase 1.
    
 0.822
LOC109987455
Cytochrome b5 reductase 4.
  
 0.776
mcat
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 0.744
LOC109998600
Hydroxysteroid (17-beta) dehydrogenase 7.
     
 0.730
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
     
 0.730
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.729
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.719
fdx2
Ferredoxin 2.
  
 0.719
eci2
Enoyl-CoA delta isomerase 2.
  
 0.696
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.