STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985033Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
ndufa2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
    0.734
LOC109981238
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
    0.720
ENSLBEP00000031207
Uncharacterized protein.
   
    0.720
atp5md
ATP synthase membrane subunit DAPIT.
   
    0.715
LOC109996280
COP9 signalosome subunit 3.
    
 
 0.664
ENSLBEP00000021056
Uncharacterized protein.
    
 
 0.664
cops5
COP9 signalosome subunit 5.
   
 
 0.654
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
   
    0.625
gps1
G protein pathway suppressor 1.
    
   0.617
cops8
COP9 signalosome subunit 8.
    
 
 0.599
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (20%) [HD]