STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uvragUV radiation resistance associated gene. (734 aa)    
Predicted Functional Partners:
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.999
becn1
Beclin 1, autophagy related.
    
 0.999
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 0.999
ENSLBEP00000033252
Uncharacterized protein.
    
 0.994
ENSLBEP00000033290
DUF4206 domain-containing protein.
    
 0.994
rubcnl
DUF4206 domain-containing protein.
    
 0.954
plekhm1
Pleckstrin homology domain containing, family M (with RUN domain) member 1.
    
 0.930
def8
Differentially expressed in FDCP 8 homolog.
    
 0.929
LOC109993923
SH3-domain GRB2-like endophilin B1a.
    
 0.921
LOC109994323
SH3-domain GRB2-like endophilin B2a.
    
 0.913
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.