STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985532Uncharacterized protein. (636 aa)    
Predicted Functional Partners:
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.564
mettl5
Methyltransferase like 5.
      
 0.547
mettl9
Methyltransferase like 9.
      
 0.546
etfb
Electron transfer flavoprotein subunit beta.
     
 0.515
ntmt1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
  
 0.512
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
    
  0.494
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.470
LOC110000677
Zgc:136908; Belongs to the AAA ATPase family.
    
 0.470
ENSLBEP00000002046
Uncharacterized protein.
    
  0.455
spata5l1
Spermatogenesis associated 5-like 1.
    
  0.455
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.