ENSLBEP00000017295 protein (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSLBEP00000017295

Uncharacterized protein. (281 aa)

Predicted Functional Partners:

pla2g15

0.731

lcat

0.731

chdh

0.713

ift46

0.713

acsl4

0.675

acsl3

0.675

LOC109984045

0.675

lypla2

0.669

lyplal1

0.669

lypla1

0.669

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000017295	LOC109984045	ENSLBEP00000017295	ENSLBEP00000030251	Uncharacterized protein.	Acyl-CoA synthetase long chain family member 3b.	0.675
ENSLBEP00000017295	acsl3	ENSLBEP00000017295	ENSLBEP00000023403	Uncharacterized protein.	AMP-binding domain-containing protein.	0.675
ENSLBEP00000017295	acsl4	ENSLBEP00000017295	ENSLBEP00000018499	Uncharacterized protein.	Acyl-CoA synthetase long chain family member 4a.	0.675
ENSLBEP00000017295	chdh	ENSLBEP00000017295	ENSLBEP00000012330	Uncharacterized protein.	Choline dehydrogenase.	0.713
ENSLBEP00000017295	ift46	ENSLBEP00000017295	ENSLBEP00000017645	Uncharacterized protein.	Intraflagellar transport 46 homolog (Chlamydomonas).	0.713
ENSLBEP00000017295	lcat	ENSLBEP00000017295	ENSLBEP00000011028	Uncharacterized protein.	Lecithin-cholesterol acyltransferase.	0.731
ENSLBEP00000017295	lypla1	ENSLBEP00000017295	ENSLBEP00000030996	Uncharacterized protein.	Lysophospholipase 1.	0.669
ENSLBEP00000017295	lypla2	ENSLBEP00000017295	ENSLBEP00000004041	Uncharacterized protein.	Lysophospholipase 2.	0.669
ENSLBEP00000017295	lyplal1	ENSLBEP00000017295	ENSLBEP00000022440	Uncharacterized protein.	Lysophospholipase like 1.	0.669
ENSLBEP00000017295	pla2g15	ENSLBEP00000017295	ENSLBEP00000010982	Uncharacterized protein.	Phospholipase A2, group XV.	0.731
LOC109984045	ENSLBEP00000017295	ENSLBEP00000030251	ENSLBEP00000017295	Acyl-CoA synthetase long chain family member 3b.	Uncharacterized protein.	0.675
LOC109984045	acsl3	ENSLBEP00000030251	ENSLBEP00000023403	Acyl-CoA synthetase long chain family member 3b.	AMP-binding domain-containing protein.	0.840
LOC109984045	acsl4	ENSLBEP00000030251	ENSLBEP00000018499	Acyl-CoA synthetase long chain family member 3b.	Acyl-CoA synthetase long chain family member 4a.	0.841
acsl3	ENSLBEP00000017295	ENSLBEP00000023403	ENSLBEP00000017295	AMP-binding domain-containing protein.	Uncharacterized protein.	0.675
acsl3	LOC109984045	ENSLBEP00000023403	ENSLBEP00000030251	AMP-binding domain-containing protein.	Acyl-CoA synthetase long chain family member 3b.	0.840
acsl3	acsl4	ENSLBEP00000023403	ENSLBEP00000018499	AMP-binding domain-containing protein.	Acyl-CoA synthetase long chain family member 4a.	0.841
acsl4	ENSLBEP00000017295	ENSLBEP00000018499	ENSLBEP00000017295	Acyl-CoA synthetase long chain family member 4a.	Uncharacterized protein.	0.675
acsl4	LOC109984045	ENSLBEP00000018499	ENSLBEP00000030251	Acyl-CoA synthetase long chain family member 4a.	Acyl-CoA synthetase long chain family member 3b.	0.841
acsl4	acsl3	ENSLBEP00000018499	ENSLBEP00000023403	Acyl-CoA synthetase long chain family member 4a.	AMP-binding domain-containing protein.	0.841
chdh	ENSLBEP00000017295	ENSLBEP00000012330	ENSLBEP00000017295	Choline dehydrogenase.	Uncharacterized protein.	0.713