STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chordc1Cysteine and histidine-rich domain (CHORD) containing 1b. (340 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.977
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.968
PPP5C
Serine/threonine-protein phosphatase.
   
 0.952
LOC109995474
Serine/threonine-protein phosphatase 5.
   
 0.952
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.925
LOC109982952
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.925
LOC109982928
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.925
ENSLBEP00000010675
Uncharacterized protein.
   
 0.920
LOC109985666
TSC complex subunit 1b.
   
 0.920
trap1
TNF receptor-associated protein 1.
   
 0.920
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.