STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109983841TPR_REGION domain-containing protein. (725 aa)    
Predicted Functional Partners:
LOC109980199
Uncharacterized protein.
    
 
 0.911
numa1
Uncharacterized protein.
    
 
 0.911
LOC109988868
Uncharacterized protein.
   
 0.855
LOC109999353
Guanine nucleotide binding protein (G protein) alpha v1.
   
 0.855
LOC109990103
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
   
 0.855
LOC109982845
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.855
LOC109982888
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.855
LOC110001890
Uncharacterized protein.
   
 0.855
LOC109980613
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
   
 0.855
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.855
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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