STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110004065Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (301 aa)    
Predicted Functional Partners:
LOC109998513
Cathepsin F; Belongs to the peptidase C1 family.
   
0.855
LOC109994717
Baculoviral IAP repeat containing 5a.
     
 0.842
LOC109984203
Baculoviral IAP repeat containing 5b.
     
 0.835
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
0.830
xiap
X-linked inhibitor of apoptosis.
     
 0.828
LOC109998212
Baculoviral IAP repeat containing 2.
     
 0.828
LOC109983907
BH4_2 domain-containing protein.
     
 0.826
LOC109985084
BCL2 like 1.
     
 0.826
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
0.808
LOC109992849
Cathepsin Ba; Belongs to the peptidase C1 family.
   
0.766
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.