ENSLBEP00000017498 protein (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSLBEP00000017498

G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (125 aa)

Predicted Functional Partners:

ENSLBEP00000017470

0.918

ENSLBEP00000033866

0.703

LOC109990259

0.627

npy

0.604

LOC109995765

0.603

LOC109987747

0.593

LOC109997138

0.593

LOC109981808

0.593

gng3

0.592

LOC109983605

0.592

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000017470	ENSLBEP00000017498	ENSLBEP00000017470	ENSLBEP00000017498	G_PROTEIN_RECEP_F1_2 domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.918
ENSLBEP00000017470	ENSLBEP00000033866	ENSLBEP00000017470	ENSLBEP00000033866	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.703
ENSLBEP00000017470	LOC109981808	ENSLBEP00000017470	ENSLBEP00000037484	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.640
ENSLBEP00000017470	LOC109983605	ENSLBEP00000017470	ENSLBEP00000005987	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.605
ENSLBEP00000017470	LOC109987747	ENSLBEP00000017470	ENSLBEP00000007265	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.595
ENSLBEP00000017470	LOC109990259	ENSLBEP00000017470	ENSLBEP00000022803	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Endothelin 1.	0.640
ENSLBEP00000017470	LOC109995765	ENSLBEP00000017470	ENSLBEP00000005505	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Peptide YYa.	0.605
ENSLBEP00000017470	LOC109997138	ENSLBEP00000017470	ENSLBEP00000026093	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha 14.	0.593
ENSLBEP00000017470	gng3	ENSLBEP00000017470	ENSLBEP00000003363	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.605
ENSLBEP00000017470	npy	ENSLBEP00000017470	ENSLBEP00000006782	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Neuropeptide Y.	0.612
ENSLBEP00000017498	ENSLBEP00000017470	ENSLBEP00000017498	ENSLBEP00000017470	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.918
ENSLBEP00000017498	ENSLBEP00000033866	ENSLBEP00000017498	ENSLBEP00000033866	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.703
ENSLBEP00000017498	LOC109981808	ENSLBEP00000017498	ENSLBEP00000037484	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.593
ENSLBEP00000017498	LOC109983605	ENSLBEP00000017498	ENSLBEP00000005987	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.592
ENSLBEP00000017498	LOC109987747	ENSLBEP00000017498	ENSLBEP00000007265	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.593
ENSLBEP00000017498	LOC109990259	ENSLBEP00000017498	ENSLBEP00000022803	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin 1.	0.627
ENSLBEP00000017498	LOC109995765	ENSLBEP00000017498	ENSLBEP00000005505	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Peptide YYa.	0.603
ENSLBEP00000017498	LOC109997138	ENSLBEP00000017498	ENSLBEP00000026093	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 14.	0.593
ENSLBEP00000017498	gng3	ENSLBEP00000017498	ENSLBEP00000003363	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.592
ENSLBEP00000017498	npy	ENSLBEP00000017498	ENSLBEP00000006782	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Neuropeptide Y.	0.604