STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994802Zgc:66440. (369 aa)    
Predicted Functional Partners:
LOC109990977
Poly [ADP-ribose] polymerase.
 
 
 
 0.886
notch1
Notch receptor 1b.
    
 0.868
LOC109998483
Notch receptor 1a.
    
 0.868
DTX1
Deltex E3 ubiquitin ligase 1.
  
 
0.863
LOC109982735
Notch receptor 2.
    
 0.860
LOC109989208
Notch receptor 3.
    
 0.860
ENSLBEP00000016803
Uncharacterized protein.
    
 0.831
ENSLBEP00000016851
Uncharacterized protein.
    
 0.831
LOC109978926
Family with sequence similarity 162 member A.
   
 
 0.796
ENSLBEP00000015381
Macro domain-containing protein.
   
 
 0.796
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.