STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF3Cleavage and polyadenylation specific factor 3. (661 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
0.994
fip1l1
FIP1 like 1b (S. cerevisiae).
    
 0.989
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.986
sympk
Symplekin.
   
 0.982
ENSLBEP00000038516
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.980
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase.
   
 0.974
ENSLBEP00000013105
Uncharacterized protein.
   
 0.973
WDR33
WD repeat domain 33.
   
 0.972
LOC109975287
WD_REPEATS_REGION domain-containing protein.
   
 0.972
ENSLBEP00000027065
WD_REPEATS_REGION domain-containing protein.
   
 0.970
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.