STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994217LIF receptor subunit alpha a. (877 aa)    
Predicted Functional Partners:
LOC109981676
Uncharacterized protein.
    
 0.940
LOC109993697
Interleukin 11a.
  
  
 0.931
csf3r
Colony stimulating factor 3 receptor.
    
0.910
ENSLBEP00000027868
Ciliary neurotrophic factor receptor.
    
 0.874
ENSLBEP00000029117
Ig-like domain-containing protein.
    
 0.874
egf
Epidermal growth factor.
    
 0.865
LOC109998146
Uncharacterized protein.
     
 0.864
LOC109980451
Fibronectin type-III domain-containing protein.
   
 0.855
ENSLBEP00000031393
Fibronectin type-III domain-containing protein.
   
 0.855
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.853
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.