STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapk3Death-associated protein kinase 3; Belongs to the protein kinase superfamily. (453 aa)    
Predicted Functional Partners:
ENSLBEP00000016465
Death domain-containing protein.
 
      0.899
ENSLBEP00000034025
Uncharacterized protein.
 
  
   0.879
becn1
Beclin 1, autophagy related.
   
 0.869
ENSLBEP00000008225
Uncharacterized protein.
 
  
   0.845
dapk2
Death-associated protein kinase 2b; Belongs to the protein kinase superfamily.
  
  
 
0.829
LOC110001410
Death-associated protein kinase 2a.
  
  
 
0.828
ENSLBEP00000001041
Uncharacterized protein.
 
  
   0.815
ENSLBEP00000034108
Uncharacterized protein.
 
  
   0.812
LOC109983664
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.804
LOC109989518
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.804
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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