STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992449Zgc:154055. (554 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
  
0.937
LOC109988227
Myotubularin related protein 7b.
  
0.935
LOC109981057
Myotubularin related protein 7a.
  
0.934
ENSLBEP00000007591
Uncharacterized protein.
 
 
 0.818
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.773
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.747
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.700
LOC110003253
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
     
 0.698
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
 0.688
LOC109992450
L-threonine dehydrogenase 2.
 
   
  0.671
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.