STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110006287Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
ENSLBEP00000004755
Uncharacterized protein.
    
 0.922
ENSLBEP00000004788
Uncharacterized protein.
    
 0.922
LOC109990056
Intersectin 2a.
    
 0.922
LOC109983404
Im:7152348.
   
 0.872
LOC109987944
Intersectin 1 (SH3 domain protein).
    
 0.871
ENSLBEP00000033866
Uncharacterized protein.
   
 0.836
copg2
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.830
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.825
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
   
 0.819
LOC110003253
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
    
 0.804
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.