STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbckTBC1 domain containing kinase. (888 aa)    
Predicted Functional Partners:
cunh12orf4
Zgc:154077.
    
 
 0.801
il6r
Interleukin 6 receptor.
    
   0.610
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
 
 0.597
nme6
NME/NM23 nucleoside diphosphate kinase 6; Belongs to the NDK family.
   
  
 0.562
LOC109990322
Canopy FGF signaling regulator 2.
      
 0.533
LOC109996086
MOB kinase activator 3C.
      
 0.428
LOC110001384
MOB kinase activator 3A.
      
 0.428
POLR2E
RNA polymerase II subunit E.
      
 0.424
wdr47
WD repeat domain 47a.
      
 0.418
LOC109987709
Glutaredoxin domain-containing protein.
      
 0.408
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.