STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TREHTrehalase. (576 aa)    
Predicted Functional Partners:
LOC109980064
Protein YIPF.
  
 0.969
LOC109977247
Protein YIPF6-like.
  
 0.969
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.947
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 0.946
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.839
pudp
Pseudouridine 5'-phosphatase.
   
 
 0.836
LOC109998058
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
  0.818
LOC109998056
Epimerase_2 domain-containing protein.
  
 
  0.818
LOC109981093
Alpha-amylase.
  
 
 0.760
ENSLBEP00000001710
Catalase domain-containing protein.
   
  
 0.743
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.