STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX14Sorting nexin 14. (989 aa)    
Predicted Functional Partners:
tmem167b
Protein kish; Involved in the early part of the secretory pathway.
     
 0.564
snx13
Sorting nexin 13.
   
 
0.553
stx10
Syntaxin 10.
    
 0.542
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.536
stx8
Syntaxin 8.
    
 0.531
LOC110006059
Syntaxin 8.
    
 0.531
LOC109996826
Sorting nexin 12.
     
 0.517
snx3
Sorting nexin 3.
     
 0.517
SNX11
Sorting nexin 11.
     
 0.493
LOC109994644
Sorting nexin 10a.
     
 0.491
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.